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KIT-Sch-GE
2021 Cell Tracking
Commits
2fb14bfc
Commit
2fb14bfc
authored
Mar 23, 2021
by
katharina.loeffler
Browse files
Update run_tracking.py
parent
4527959d
Changes
1
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Inline
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run_tracking.py
View file @
2fb14bfc
...
...
@@ -9,7 +9,7 @@ from tracker.extract_data import get_indices_pandas
from
tracker.tracking
import
TrackingConfig
,
MultiCellTracker
def
run_
g
ra
ph2_0
(
img_path
,
segm_path
,
res_path
,
delta_t
=
3
,
default_roi_size
=
2
):
def
run_
t
ra
cker
(
img_path
,
segm_path
,
res_path
,
delta_t
=
3
,
default_roi_size
=
2
):
img_path
=
Path
(
img_path
)
segm_path
=
Path
(
segm_path
)
res_path
=
Path
(
res_path
)
...
...
@@ -55,4 +55,4 @@ if __name__ == '__main__':
ARGS
=
PARSER
.
parse_args
()
run_
g
ra
ph2_0
(
ARGS
.
image_path
,
ARGS
.
segmentation_path
,
ARGS
.
results_path
,
ARGS
.
delta_t
,
ARGS
.
default_roi_size
)
run_
t
ra
cker
(
ARGS
.
image_path
,
ARGS
.
segmentation_path
,
ARGS
.
results_path
,
ARGS
.
delta_t
,
ARGS
.
default_roi_size
)
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