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Commit 13a93f43 authored by steffen.schotthoefer's avatar steffen.schotthoefer
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Merge branch 'sprint1' into 'develop' 

Sprint1 afterparty

See merge request !21
parents 67679152 7452bd51
Pipeline #120269 passed with stage
in 17 minutes
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.gitignore
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......@@ -321,7 +321,7 @@ TSWLatexianTemp*
### Python ###
# Byte-compiled / optimized / DLL files
__pycache__/
__pycache__/*
*.py[cod]
*$py.class
......@@ -387,6 +387,9 @@ target/
# pyenv
.python-version
# pycharm
.idea/
# pipenv
# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
# However, in case of collaboration, if having platform-specific dependencies or dependencies
......@@ -432,6 +435,9 @@ dmypy.json
# Qt Creator autogenerated files
# other
*.cflags
*.cxxflags
# A listing of all the files included in the project
*.files
......
.gitlab-ci.yml
View file @ 13a93f43
image: rtsn/test:latest
stages:
- build
- unit_tests
build:
stage: build
script:
- git submodule update --init --recursive
- cd code/build/debug
- cmake -G Ninja -DCMAKE_BUILD_TYPE=Debug -DBUILD_TESTING=True ../../
- ninja
timeout: 2h
only:
refs:
- master
- merge_requests
changes:
- "code/include/**/*"
- "code/tests/**/*"
- "code/src/**/*"
- "code/CMakeLists.txt"
- "scripts/Dockerfile"
- ".gitmodules"
unit_tests:
stage: unit_tests
script:
- git submodule update --init --recursive
- cd code/build/release
- cmake -G Ninja -DCMAKE_BUILD_TYPE=Release -DBUILD_TESTING=True ../../
- cmake -G Ninja -DCMAKE_BUILD_TYPE=Debug ../../
- ninja
- cd ../../bin
- ./unit_tests
timeout: 2h
only:
refs:
- master
- merge_requests
changes:
- "code/include/**/*"
- "code/tests/**/*"
- "code/src/**/*"
- "code/CMakeLists.txt"
- "scripts/Dockerfile"
- ".gitmodules"
- OMP_NUM_THREADS=1 ./unit_tests -r junit > unit_tests_report.xml
- gcovr -e ../../ext/ -e ../../tests/ -r ../../
artifacts:
when: always
paths:
- code/build/release/unit_tests_report.xml
reports:
junit: code/build/release/unit_tests_report.xml
timeout: 4h
rules:
- if: $CI_PIPELINE_SOURCE == "merge_request_event" || $CI_COMMIT_BRANCH == "master" || $CI_COMMIT_BRANCH == "develop"
changes:
- "code/include/**/*"
- "code/tests/**/*"
- "code/src/**/*"
- "code/CMakeLists.txt"
- "scripts/Dockerfile"
- ".gitmodules"
- if: $CI_PIPELINE_SOURCE == "web"
README.md
View file @ 13a93f43
# RTSN - an HPC Radio Therapy $`S_n`$ framework
[![pipeline status](https://git.scc.kit.edu/rtsn/rtsn/badges/master/pipeline.svg)](https://git.scc.kit.edu/rtsn/rtsn/-/commits/master) [![coverage report](https://git.scc.kit.edu/rtsn/rtsn/badges/master/coverage.svg)](https://git.scc.kit.edu/rtsn/rtsn/-/commits/master)
# KiT-RT - an HPC Radio Therapy $`S_n`$ framework
TBD
## What RTSN is capable of
## What KiT-RT is capable of
### Theory
TBD
### Examples
......@@ -52,17 +54,17 @@ The resulting executable will automatically be placed in the `code/bin` folder.
## Run
### Local
Execute the compiled binary and hand over a valid *TOML*-styled config file.
Execute the compiled binary from the `bin` folder and hand over a valid *TOML*-styled config file.
Example from inside the `code` directory:
```bash
./bin/RTSN input/example.cfg
./KiT-RT ../input/example.cfg
```
In order to run the code in parallel execute:
```bash
OMP_NUM_THREADS=N mpirun -np J ./bin/RTSN input/example.cfg
OMP_NUM_THREADS=N mpirun -np J ./KiT-RT ../input/example.cfg
```
with `N` equal to the number of shared memory threads and `J` equal to the number of distrubuted memory threads.
......@@ -86,8 +88,8 @@ rm -r VTK-8.2.0 VTK-build
Example for build and run on bwUniCluster:
Get the code
```bash
git clone https://git.scc.kit.edu/rtsn/rtsn.git
cd rtsn/
git clone https://git.scc.kit.edu/rtsn/rtsn.git KiT-RT
cd KiT-RT/
git submodule init
git submodule update
```
......@@ -109,13 +111,13 @@ make -j
---
## Tests
In order to also compile the unit tests, add `-DBUILD_TESTING=True` to the cmake command, e.g.:
After compiling the framework as described above just run:
```bash
cmake -DCMAKE_BUILD_TYPE=Release -DBUILD_TESTING=True ../../
make test
```
The resulting `unit_tests` executable will also be placed in `/bin`.
The `unit_tests` executable will also be placed in in the build folder.
## Continuous Integration (CI)
Every commit on the master branch will trigger a build test and unit tests.
......@@ -145,13 +147,13 @@ This last step requires a preceeding `docker login`. Ask Jannick for login crede
## Code structure
**WARNING: is not created automatically - might be out of date!**
Reverse engineered plantuml diagram of the current code structure:
![Can't load image](doc/rtsn.svg "UML diagram")
![Can't load image](doc/KiT-RT.svg "UML diagram")
<br/><br/>
Was created using [hpp2plantuml](https://github.com/thibaultmarin/hpp2plantuml) and [plantuml](https://plantuml.com/), e.g.:
```bash
cd doc
hpp2plantuml -i "../code/include/*.h" -i "../code/include/*/*.h" -o rtsn.puml
plantuml rtsn.puml -tsvg
hpp2plantuml -i "../code/include/*.h" -i "../code/include/*/*.h" -o KiT-RT.puml
plantuml KiT-RT.puml -tsvg
```
---
......
code/CMakeLists.txt 100755 → 100644
View file @ 13a93f43
cmake_minimum_required( VERSION 3.12.4 )
project( RTSN VERSION 0.1.0 LANGUAGES CXX )
project( KiT-RT VERSION 0.1.0 LANGUAGES CXX )
### COMPILER ####################################
set( CMAKE_CXX_STANDARD 17 )
set( CMAKE_CXX_STANDARD_REQUIRED ON )
set( KITRT_RELEASE_OPTIONS -march=native -w )
set( KITRT_RELWITHDEBINFO_OPTIONS -march=native -pg -no-pie )
set( KITRT_DEBUG_OPTIONS -Wall -Wextra -Wpedantic )
#################################################
set( CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS_RELEASE} -march=native -Wno-dev" )
set( CMAKE_CXX_FLAGS_RELWITHDEBINFO "${CMAKE_CXX_FLAGS_RELWITHDEBINFO} -march=native -pg -no-pie" )
set( CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -O0 -Wall" )
set( CMAKE_RUNTIME_OUTPUT_DIRECTORY "${CMAKE_SOURCE_DIR}/bin" )
file( GLOB_RECURSE SRCS RELATIVE ${CMAKE_SOURCE_DIR} "src/*.cpp" "include/*.h" )
include_directories( ${CMAKE_SOURCE_DIR}/include )
add_executable( ${CMAKE_PROJECT_NAME} ${SRCS} )
find_package( Python3 COMPONENTS Interpreter Development NumPy REQUIRED )
include_directories( ${Python3_INCLUDE_DIRS} ${Python3_NumPy_INCLUDE_DIRS} )
add_compile_definitions( RTSN_PYTHON_PATH="${CMAKE_SOURCE_DIR}/python" )
### LIBRARIES ###################################
set(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake ${CMAKE_MODULE_PATH})
find_package( OpenMP REQUIRED )
if( OPENMP_FOUND )
set( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}" )
set( CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}" )
endif()
find_package( MPI REQUIRED )
include_directories( ${MPI_INCLUDE_PATH} )
......@@ -30,6 +23,15 @@ find_package( LAPACK REQUIRED )
include_directories( ${LAPACK_INCLUDE_DIR} )
find_package( BLAS )
find_package( VTK REQUIRED COMPONENTS vtkIOGeometry vtkFiltersCore )
find_package( Python3 COMPONENTS Interpreter Development NumPy REQUIRED )
include_directories( ${Python3_INCLUDE_DIRS} ${Python3_NumPy_INCLUDE_DIRS} )
add_compile_definitions( KITRT_PYTHON_PATH="${CMAKE_SOURCE_DIR}/python" )
add_compile_definitions( BLAZE_USE_SHARED_MEMORY_PARALLELIZATION=0 )
message( STATUS "Blaze: Shared memory parallelization disabled" )
if( BLAS_FOUND )
message( STATUS "Blaze: BLAS mode enabled" )
add_compile_definitions( BLAZE_BLAS_MODE=1 )
......@@ -38,80 +40,7 @@ else()
message( STATUS "Blaze: BLAS mode disabled" )
add_compile_definitions( BLAZE_BLAS_MODE=0 )
endif()
add_compile_definitions( BLAZE_USE_SHARED_MEMORY_PARALLELIZATION=0 )
set(flag 1)
if (WIN32)
execute_process(COMMAND wmic cpu get L3CacheSize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
if (flag)
execute_process(COMMAND wmic cpu get L2CacheSize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
if (flag)
execute_process(COMMAND wmic cpu get L1CacheSize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
endif (WIN32)
if (UNIX)
execute_process(COMMAND cat /sys/devices/system/cpu/cpu0/cache/index3/size
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
if (flag)
execute_process(COMMAND cat /sys/devices/system/cpu/cpu0/cache/index2/size
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
if (flag)
execute_process(COMMAND cat /sys/devices/system/cpu/cpu0/cache/index1/size
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
endif (UNIX)
if (APPLE)
execute_process(COMMAND sysctl -n hw.l3cachesize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
if (flag)
execute_process(COMMAND sysctl -n hw.l2cachesize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
if (flag)
execute_process(COMMAND sysctl -n hw.l1icachesize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
if (flag EQUAL 0)
math(EXPR tmp ${tmp}/1024) # If successful convert to kibibytes to comply with rest
endif (flag EQUAL 0)
endif (APPLE)
if (flag)
message(WARNING "Cache size not found automatically. Using default value as cache size.")
set(tmp "3072")
endif (flag)
string( REGEX MATCH "([0-9][0-9]+)" tmp ${tmp} )
math( EXPR BLAZE_CACHE_SIZE ${tmp}*1024 )
add_compile_definitions( BLAZE_CACHE_SIZE=${BLAZE_CACHE_SIZE}UL )
message( STATUS "Blaze: Automatic Cache Size Configuration = ${BLAZE_CACHE_SIZE} KiB" )
include( blaze-cache-config )
include_directories( ${CMAKE_SOURCE_DIR}/ext/blaze )
add_compile_definitions( METIS_EXPORT= )
......@@ -121,12 +50,14 @@ include_directories( ${ParMETIS_PATH}/include )
include_directories( ${ParMETIS_PATH}/metis/include )
add_subdirectory( ${ParMETIS_PATH} )
find_package( VTK REQUIRED COMPONENTS vtkIOGeometry vtkFiltersCore HINTS /home/pia/vtk-inst/include/vtk-8.2)
include(${VTK_USE_FILE})
include_directories( ${CMAKE_SOURCE_DIR}/ext/cpptoml/include )
include_directories( ${CMAKE_SOURCE_DIR}/ext/spdlog/include )
set( CORE_LIBRARIES ${Python3_LIBRARIES} ${LAPACK_LIBRARIES} ${BLAS_LIBRARIES} ${MPI_LIBRARIES} ${VTK_LIBRARIES} OpenMP::OpenMP_CXX parmetis -lstdc++fs )
#################################################
### MISC ########################################
execute_process(
COMMAND git rev-parse HEAD
WORKING_DIRECTORY ${CMAKE_SOURCE_DIR}
......@@ -134,17 +65,42 @@ execute_process(
OUTPUT_STRIP_TRAILING_WHITESPACE
)
add_compile_definitions( GIT_HASH="${GIT_HASH}" )
#################################################
set( CORE_LIBRARIES ${Python3_LIBRARIES} ${LAPACK_LIBRARIES} ${BLAS_LIBRARIES} ${MPI_LIBRARIES} ${VTK_LIBRARIES} OpenMP::OpenMP_CXX parmetis -lstdc++fs )
### BUILD KIT-RT ################################
file( GLOB_RECURSE SRCS RELATIVE ${CMAKE_SOURCE_DIR} "src/*.cpp" "include/*.h" )
include_directories( ${CMAKE_SOURCE_DIR}/include )
add_executable( ${CMAKE_PROJECT_NAME} ${SRCS} ${EXT_SRCS} )
target_link_libraries( ${CMAKE_PROJECT_NAME} ${CORE_LIBRARIES} )
if( BUILD_TESTING )
add_compile_definitions( BUILD_TESTING=1 )
add_subdirectory( ${CMAKE_SOURCE_DIR}/ext/Catch2 )
include_directories( ${CMAKE_SOURCE_DIR}/ext/Catch2/single_include/catch2 )
file( GLOB_RECURSE TEST_SRCS RELATIVE ${CMAKE_SOURCE_DIR} "tests/*.cpp" )
list( REMOVE_ITEM SRCS "src/main.cpp" )
add_executable( unit_tests ${SRCS} ${TEST_SRCS} )
target_link_libraries( unit_tests ${CORE_LIBRARIES} )
set_target_properties( ${CMAKE_PROJECT_NAME} PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${CMAKE_SOURCE_DIR}/bin" )
target_compile_options( ${CMAKE_PROJECT_NAME} PUBLIC "$<$<CONFIG:DEBUG>:${KITRT_DEBUG_OPTIONS}>" )
target_compile_options( ${CMAKE_PROJECT_NAME} PUBLIC "$<$<CONFIG:RELWITHDEBINFO>:${KITRT_RELWITHDEBINFO_OPTIONS}>" )
target_compile_options( ${CMAKE_PROJECT_NAME} PUBLIC "$<$<CONFIG:RELEASE>:${KITRT_RELEASE_OPTIONS}>" )
#################################################
### BUILD UNIT TESTS ############################
include( CTest )
set( CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/ext/Catch2/contrib ${CMAKE_MODULE_PATH} )
include( Catch )
set( CATCH_INCLUDE_DIR ${CMAKE_SOURCE_DIR}/ext/Catch2/single_include/catch2 )
add_compile_definitions( BUILD_TESTING )
add_compile_definitions( TESTS_PATH="${CMAKE_SOURCE_DIR}/tests/" )
add_library( Catch INTERFACE )
target_include_directories( Catch INTERFACE ${CATCH_INCLUDE_DIR} )
file( GLOB_RECURSE TEST_SRCS RELATIVE ${CMAKE_SOURCE_DIR} "tests/*.cpp" )
list( REMOVE_ITEM SRCS "src/main.cpp" )
add_executable( unit_tests ${TEST_SRCS} ${SRCS} ${EXT_SRCS} )
target_link_libraries( unit_tests Catch ${CORE_LIBRARIES} )
target_compile_options( unit_tests PUBLIC "$<$<CONFIG:DEBUG>:${KITRT_DEBUG_OPTIONS}>" )
if( CMAKE_COMPILER_IS_GNUCXX )
set( CODE_COVERAGE_OPTIONS --coverage -g -O0 -w )
target_compile_options( unit_tests PUBLIC "$<$<CONFIG:DEBUG>:${CODE_COVERAGE_OPTIONS}>" )
target_link_libraries( unit_tests Catch gcov )
endif()
target_compile_options( unit_tests PUBLIC "$<$<CONFIG:RELWITHDEBINFO>:${KITRT_RELWITHDEBINFO_OPTIONS}>" )
target_compile_options( unit_tests PUBLIC "$<$<CONFIG:RELEASE>:${KITRT_RELEASE_OPTIONS}>" )
catch_discover_tests( unit_tests )
enable_testing()
#################################################
code/cmake/blaze-cache-config.cmake 0 → 100644
View file @ 13a93f43
set(flag 1)
if (WIN32)
execute_process(COMMAND wmic cpu get L3CacheSize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
if (flag)
execute_process(COMMAND wmic cpu get L2CacheSize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
if (flag)
execute_process(COMMAND wmic cpu get L1CacheSize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
endif (WIN32)
if (UNIX)
execute_process(COMMAND cat /sys/devices/system/cpu/cpu0/cache/index3/size
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
if (flag)
execute_process(COMMAND cat /sys/devices/system/cpu/cpu0/cache/index2/size
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
if (flag)
execute_process(COMMAND cat /sys/devices/system/cpu/cpu0/cache/index1/size
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
endif (UNIX)
if (APPLE)
execute_process(COMMAND sysctl -n hw.l3cachesize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
if (flag)
execute_process(COMMAND sysctl -n hw.l2cachesize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
if (flag)
execute_process(COMMAND sysctl -n hw.l1icachesize
OUTPUT_VARIABLE tmp
RESULT_VARIABLE flag
ERROR_QUIET)
endif (flag)
if (flag EQUAL 0)
math(EXPR tmp ${tmp}/1024) # If successful convert to kibibytes to comply with rest
endif (flag EQUAL 0)
endif (APPLE)
if (flag)
message(WARNING "Cache size not found automatically. Using default value as cache size.")
set(tmp "3072")
endif (flag)
string( REGEX MATCH "([0-9][0-9]+)" tmp ${tmp} )
math( EXPR BLAZE_CACHE_SIZE ${tmp}*1024 )
add_compile_definitions( BLAZE_CACHE_SIZE=${BLAZE_CACHE_SIZE}UL )
message( STATUS "Blaze: Automatic Cache Size Configuration = ${BLAZE_CACHE_SIZE} KiB" )
code/data/elsep-database/eeldx001.tab 0 → 100644
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code/data/elsep-database/eeldx008.tab 0 → 100644
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code/data/elsep-database/peldx001.tab 0 → 100644
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code/data/elsep-database/peldx008.tab 0 → 100644
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code/data/material/mater278.stp 0 → 100644
View file @ 13a93f43
**** Material composition, oscillator data and
stopping powers for electrons and positrons.
Material # 278, WATER, LIQUID
Mass density = 1.00000000E+00 g/cm**3
Number of elements in the molecule = 2
atomic number = 1, atoms/molecule = 2.00000000E+00
atomic number = 8, atoms/molecule = 1.00000000E+00
Mean excitation energy = 7.50000000E+01 eV
Number of oscillators = 3
Fi Ui (eV) Wi (eV)
---------------------------------------------------
1 6.00000000E+00 1.36133333E+01 3.13708109E+01
2 2.00000000E+00 2.84800000E+01 6.40292871E+01
3 2.00000000E+00 5.38000000E+02 1.20046753E+03
Stopping powers. mtu=g/cm**2
Energy Scol,e- Srad,e- Scol,e+ Srad,e+
(eV) (MeV/mtu) (MeV/mtu) (MeV/mtu) (MeV/mtu)
------------------------------------------------------------
5.00E+01 3.70852E+02 1.36585E-03 4.92645E+02 1.73951E-04
6.00E+01 3.69967E+02 1.42600E-03 5.11158E+02 1.95865E-04
7.00E+01 4.13339E+02 1.47902E-03 5.49996E+02 2.16318E-04
8.00E+01 4.27409E+02 1.52679E-03 5.58552E+02 2.35605E-04
9.00E+01 4.26017E+02 1.57017E-03 5.52407E+02 2.53874E-04
1.00E+02 4.18657E+02 1.61021E-03 5.40424E+02 2.71305E-04
1.25E+02 3.92215E+02 1.69862E-03 5.02921E+02 3.11773E-04
1.50E+02 3.68877E+02 1.77471E-03 4.65656E+02 3.48695E-04
1.75E+02 3.46353E+02 1.84203E-03 4.32255E+02 3.82856E-04
2.00E+02 3.25742E+02 1.90258E-03 4.03025E+02 4.14753E-04
2.50E+02 2.90852E+02 2.00847E-03 3.55191E+02 4.73136E-04
3.00E+02 2.63017E+02 2.09988E-03 3.18078E+02 5.25980E-04
3.50E+02 2.40447E+02 2.18058E-03 2.88540E+02 5.74506E-04
4.00E+02 2.21797E+02 2.25339E-03 2.64472E+02 6.19653E-04
4.50E+02 2.06121E+02 2.31960E-03 2.44465E+02 6.61928E-04
5.00E+02 1.92746E+02 2.38084E-03 2.27551E+02 7.01905E-04
6.00E+02 1.71091E+02 2.49090E-03 2.00463E+02 7.76038E-04
7.00E+02 1.54264E+02 2.58825E-03 1.79664E+02 8.43986E-04
8.00E+02 1.40771E+02 2.67599E-03 1.63141E+02 9.07065E-04
9.00E+02 1.29681E+02 2.75615E-03 1.49665E+02 9.66183E-04
1.00E+03 1.20387E+02 2.83015E-03 1.38442E+02 1.02199E-03
1.25E+03 1.03967E+02 2.99172E-03 1.18648E+02 1.14897E-03
1.50E+03 9.25403E+01 3.12146E-03 1.05352E+02 1.25919E-03
1.75E+03 8.31983E+01 3.22408E-03 9.45899E+01 1.35470E-03
2.00E+03 7.56610E+01 3.30698E-03 8.59347E+01 1.43866E-03
2.50E+03 6.43691E+01 3.43525E-03 7.29213E+01 1.58193E-03
3.00E+03 5.64172E+01 3.52937E-03 6.35888E+01 1.70068E-03
3.50E+03 5.03563E+01 3.60082E-03 5.65473E+01 1.80148E-03
4.00E+03 4.55809E+01 3.65660E-03 5.10302E+01 1.88866E-03
4.50E+03 4.17146E+01 3.70083E-03 4.65809E+01 1.96505E-03
5.00E+03 3.85149E+01 3.73660E-03 4.29102E+01 2.03283E-03
6.00E+03 3.35140E+01 3.79027E-03 3.71941E+01 2.14847E-03
7.00E+03 2.97717E+01 3.82778E-03 3.29339E+01 2.24410E-03
8.00E+03 2.68565E+01 3.85514E-03 2.96262E+01 2.32525E-03
9.00E+03 2.45157E+01 3.87499E-03 2.69777E+01 2.39498E-03
1.00E+04 2.25910E+01 3.89031E-03 2.48054E+01 2.45624E-03
1.25E+04 1.89924E+01 3.91535E-03 2.07574E+01 2.58175E-03
1.50E+04 1.64805E+01 3.92847E-03 1.79434E+01 2.67913E-03
1.75E+04 1.46201E+01 3.93520E-03 1.58660E+01 2.75763E-03
2.00E+04 1.31828E+01 3.94039E-03 1.42652E+01 2.82421E-03
2.50E+04 1.10997E+01 3.95251E-03 1.19524E+01 2.93548E-03
3.00E+04 9.65695E+00 3.96525E-03 1.03559E+01 3.02585E-03
3.50E+04 8.59518E+00 3.97694E-03 9.18408E+00 3.10082E-03
4.00E+04 7.77929E+00 3.98823E-03 8.28550E+00 3.16496E-03
4.50E+04 7.13175E+00 3.99954E-03 7.57359E+00 3.22120E-03
5.00E+04 6.60477E+00 4.01265E-03 6.99509E+00 3.27279E-03
6.00E+04 5.79786E+00 4.04514E-03 6.11088E+00 3.36762E-03
7.00E+04 5.20822E+00 4.08256E-03 5.46605E+00 3.45378E-03
8.00E+04 4.75809E+00 4.12356E-03 4.97457E+00 3.53407E-03
9.00E+04 4.40304E+00 4.16748E-03 4.58741E+00 3.61040E-03
1.00E+05 4.11580E+00 4.21392E-03 4.27453E+00 3.68405E-03
1.25E+05 3.59175E+00 4.33880E-03 3.70450E+00 3.86111E-03
1.50E+05 3.23794E+00 4.47486E-03 3.32024E+00 4.03432E-03
1.75E+05 2.98383E+00 4.62060E-03 3.04455E+00 4.20769E-03
2.00E+05 2.79321E+00 4.77605E-03 2.83788E+00 4.38423E-03
2.50E+05 2.52822E+00 5.11547E-03 2.55070E+00 4.75293E-03
3.00E+05 2.35500E+00 5.48815E-03 2.36296E+00 5.14416E-03
3.50E+05 2.23483E+00 5.89073E-03 2.23263E+00 5.55872E-03
4.00E+05 2.14799E+00 6.31882E-03 2.13830E+00 5.99460E-03
4.50E+05 2.08317E+00 6.76912E-03 2.06777E+00 6.44990E-03
5.00E+05 2.03313E+00 7.23911E-03 2.01324E+00 6.92297E-03
6.00E+05 1.96227E+00 8.23473E-03 1.93581E+00 7.92086E-03
7.00E+05 1.91608E+00 9.29369E-03 1.88507E+00 8.97908E-03
8.00E+05 1.88491E+00 1.04109E-02 1.85058E+00 1.00938E-02
9.00E+05 1.86341E+00 1.15735E-02 1.82656E+00 1.12532E-02
1.00E+06 1.84842E+00 1.27827E-02 1.80960E+00 1.24587E-02
1.25E+06 1.82807E+00 1.59725E-02 1.78578E+00 1.56392E-02
1.50E+06 1.82099E+00 1.93754E-02 1.77646E+00 1.90338E-02
1.75E+06 1.82040E+00 2.29647E-02 1.77430E+00 2.26164E-02
2.00E+06 1.82318E+00 2.67121E-02 1.77591E+00 2.63589E-02
2.50E+06 1.83327E+00 3.45981E-02 1.78439E+00 3.42405E-02
3.00E+06 1.84547E+00 4.29315E-02 1.79550E+00 4.25753E-02
3.50E+06 1.85788E+00 5.16306E-02 1.80712E+00 5.12801E-02
4.00E+06 1.86983E+00 6.06341E-02 1.81849E+00 6.02927E-02
4.50E+06 1.88112E+00 6.98826E-02 1.82931E+00 6.95527E-02
5.00E+06 1.89170E+00 7.93339E-02 1.83952E+00 7.90171E-02
6.00E+06 1.91083E+00 9.87446E-02 1.85807E+00 9.84566E-02
7.00E+06 1.92761E+00 1.18788E-01 1.87444E+00 1.18529E-01
8.00E+06 1.94245E+00 1.39368E-01 1.88896E+00 1.39138E-01
9.00E+06 1.95569E+00 1.60384E-01 1.90196E+00 1.60181E-01
1.00E+07 1.96762E+00 1.81765E-01 1.91369E+00 1.81586E-01
1.25E+07 1.99296E+00 2.36496E-01 1.93866E+00 2.36367E-01
1.50E+07 2.01357E+00 2.92656E-01 1.95902E+00 2.92565E-01
1.75E+07 2.03082E+00 3.49939E-01 1.97609E+00 3.49874E-01
2.00E+07 2.04556E+00 4.08148E-01 1.99069E+00 4.08103E-01
2.50E+07 2.06964E+00 5.26832E-01 2.01458E+00 5.26809E-01
3.00E+07 2.08871E+00 6.47665E-01 2.03353E+00 6.47653E-01
3.50E+07 2.10439E+00 7.70024E-01 2.04911E+00 7.70018E-01
4.00E+07 2.11764E+00 8.93826E-01 2.06229E+00 8.93823E-01
4.50E+07 2.12909E+00 1.01898E+00 2.07368E+00 1.01898E+00
5.00E+07 2.13915E+00 1.14502E+00 2.08370E+00 1.14502E+00
6.00E+07 2.15621E+00 1.39879E+00 2.10069E+00 1.39879E+00
7.00E+07 2.17034E+00 1.65536E+00 2.11478E+00 1.65536E+00
8.00E+07 2.18241E+00 1.91442E+00 2.12681E+00 1.91442E+00
9.00E+07 2.19294E+00 2.17525E+00 2.13731E+00 2.17525E+00
1.00E+08 2.20229E+00 2.43750E+00 2.14663E+00 2.43750E+00
1.25E+08 2.22190E+00 3.09741E+00 2.16620E+00 3.09741E+00
1.50E+08 2.23778E+00 3.76212E+00 2.18206E+00 3.76212E+00
1.75E+08 2.25114E+00 4.43048E+00 2.19540E+00 4.43048E+00
2.00E+08 2.26267E+00 5.10164E+00 2.20691E+00 5.10164E+00
2.50E+08 2.28188E+00 6.44895E+00 2.22610E+00 6.44895E+00
3.00E+08 2.29753E+00 7.80056E+00 2.24174E+00 7.80056E+00
3.50E+08 2.31074E+00 9.15441E+00 2.25494E+00 9.15441E+00
4.00E+08 2.32217E+00 1.05108E+01 2.26636E+00 1.05108E+01
4.50E+08 2.33224E+00 1.18697E+01 2.27643E+00 1.18697E+01
5.00E+08 2.34125E+00 1.32305E+01 2.28544E+00 1.32305E+01
6.00E+08 2.35683E+00 1.59560E+01 2.30101E+00 1.59560E+01
7.00E+08 2.37000E+00 1.86873E+01 2.31417E+00 1.86873E+01
8.00E+08 2.38140E+00 2.14227E+01 2.32556E+00 2.14227E+01
9.00E+08 2.39145E+00 2.41602E+01 2.33561E+00 2.41602E+01
1.00E+09 2.40044E+00 2.68990E+01 2.34460E+00 2.68990E+01
Catch2 @ ff349a50
Compare 0e9bae1c...ff349a50
Subproject commit 0e9bae1cdb5d7bcd967bcab10539805cc3bccb32
Subproject commit ff349a50bfc6214b4081f4ca63c7de35e2162f60
blaze @ 0380370f
Subproject commit 69e2fe554e72d90efc39ceec72d8cbddf88802a8
Subproject commit 0380370f0626de2ad0ec7ea815803e22bbf6b42e
parmetis @ 263c94a2
Compare e68c8e39...263c94a2
Subproject commit e68c8e3947f9383e28cb8623d116ca996b3651a9
Subproject commit 263c94a262be616484b0bbeb33a6677411f25fbb
spdlog @ cbe94486
Compare 83b91499...cbe94486
Subproject commit 83b9149930f392d7797b54fe97a66ab3f2120671
Subproject commit cbe9448650176797739dbab13961ef4c07f4290f
code/include/settings/config.h → code/include/common/config.h
View file @ 13a93f43
/*!
* @file CConfig.h
* @brief Classes for different Options in rtsn
* @file config.h
* @brief Class to handle all options and their pre and postprocessing.
* @author S. Schotthöfer
*
* Disclaimer: This class structure was copied and modifed with open source permission from SU2 v7.0.3 https://su2code.github.io/
......@@ -11,11 +11,7 @@
#include <filesystem>
#include <map>
#include <mpi.h>
#include "spdlog/sinks/basic_file_sink.h"
#include "spdlog/sinks/stdout_sinks.h"
#include "spdlog/spdlog.h"
#include <vector>
#include "globalconstants.h"
......@@ -38,12 +34,13 @@ class Config