code restructuring

code/include/laxfriedrichsflux.h → code/include/fluxes/laxfriedrichsflux.h

@@ -2,7 +2,6 @@
 #define LAXFRIEDRICHSFLUX_H
 
 #include "numericalflux.h"
-#include "typedef.h"
 
 class LaxFriedrichsFlux : public NumericalFlux
 {

code/include/numericalflux.h → code/include/fluxes/numericalflux.h

@@ -2,7 +2,7 @@
 #define NUMERICALFLUX_H
 
 #include "settings/config.h"
-#include "typedef.h"
+#include "settings/typedef.h"
 
 class NumericalFlux
 {

code/include/upwindflux.h → code/include/fluxes/upwindflux.h

@@ -2,7 +2,6 @@
 #define UPWINDFLUX_H
 
 #include "numericalflux.h"
-#include "typedef.h"
 
 class UpwindFlux : public NumericalFlux
 {

code/include/kernels/scatteringkernelbase.h

@@ -3,7 +3,7 @@
 
 #include "quadratures/quadraturebase.h"
 #include "settings/globalconstants.h"
-#include "typedef.h"
+#include "settings/typedef.h"
 
 class ScatteringKernel
 {

code/include/mesh.h

@@ -12,8 +12,8 @@
 #include "spdlog/spdlog.h"
 
 #include "settings/globalconstants.h"
+#include "settings/typedef.h"
 #include "toolboxes/errormessages.h"
-#include "typedef.h"
 
 class Mesh
 {

code/include/physics.h

@@ -3,7 +3,7 @@
 
 // include Matrix, Vector definitions
 #include "settings/config.h"
-#include "typedef.h"
+#include "settings/typedef.h"
 
 class Physics
 {

code/include/problems/problembase.h

@@ -4,7 +4,7 @@
 #include "mesh.h"
 #include "physics.h"
 #include "settings/config.h"
-#include "typedef.h"
+#include "settings/typedef.h"
 
 class ProblemBase
 {

code/include/quadratures/quadraturebase.h

@@ -2,8 +2,8 @@
 #define QUADRATURE_H
 
 #include "settings/globalconstants.h"
+#include "settings/typedef.h"
 #include "toolboxes/errormessages.h"
-#include "typedef.h"
 #include <iostream>
 #include <string>
 

code/include/reconstructor.h

@@ -2,7 +2,7 @@
 #define RECONSTRUCTOR_H
 
 #include "settings/config.h"
-#include "typedef.h"
+#include "settings/typedef.h"
 
 class Reconstructor
 {

code/include/settings/config.h

@@ -51,11 +51,13 @@ class Config
     unsigned _nCells;
 
     // Solver
-    double _CFL;  /*!< @brief CFL Number for Solver*/
-    double _tEnd; /*!< @brief Final Time for Simulation */
-    PROBLEM_NAME _problemName;
-    SOLVER_NAME _solverName;
+    double _CFL;               /*!< @brief CFL Number for Solver*/
+    double _tEnd;              /*!< @brief Final Time for Simulation */
+    PROBLEM_NAME _problemName; /*!< @brief Name of predefined Problem   */
+    SOLVER_NAME _solverName;   /*!< @brief Name of the used Solver */
 
+    /*!< @brief If true, very low entries (10^-10 or smaller) of the flux matrices will be set to zero,
+     * to improve floating point accuracy */
     bool _cleanFluxMat;
 
     // Boundary Conditions
@@ -204,7 +206,7 @@ class Config
     double inline GetTEnd() const { return _tEnd; }
     PROBLEM_NAME inline GetProblemName() const { return _problemName; }
     SOLVER_NAME inline GetSolverName() const { return _solverName; }
-
+    bool inline GetCleanFluxMat() const { return _cleanFluxMat; }
     // Boundary Conditions
     BOUNDARY_TYPE GetBoundaryType( std::string nameMarker ) const; /*! @brief Get Boundary Type of given marker */
 

code/include/solvers/advectionsolver.h

-/*!
- * \file advectionsolver.h
- * \brief solver for entropy closure of advection equation.
- * \author S. Schotthöfer
- */
-
-//#ifndef ADVECTIONSOLVER_H
-//#define ADVECTIONSOLVER_H
-//
-//#include "settings/config.h"
-//#include <vector>
-//
-// class AdvectionSolver
-//{
-//  public:
-//    AdvectionSolver( Config* settings );
-//
-//    /*! \brief: Solves the advection problem for given lambda */
-//    void Solve( std::vector<std::vector<double>>* lambda );
-//
-//    /*! \brief: Reconstructs kintec density from given lambda and legendre dual of the entropy functional */
-//    std::vector<double>* ReconstructKineticDensity( std::vector<std::vector<double>>* lambda );
-//
-//    /* ---- Getter ---- */
-//    /*! \brief Get pointer to solution vector for each cell (moments) */
-//    std::vector<std::vector<double>>* GetSolution( void ) { return &_moments; }
-//
-//  protected:
-//    std::vector<std::vector<double>> _moments;        /*! \brief: Solution of the moment advection problem */
-//    std::vector<std::vector<double>> _kineticDensity; /*! \brief: Reconstructed kinetic Density from given lamnda */
-//};
-//
-//#endif    // ADVECTIONSOLVER_H_H

code/include/solvers/entropysolver.h

-#ifndef ENTROPYSOLVER_H
-#define ENTROPYSOLVER_H
-
-
-class EntropySolver
-{
-public:
-  EntropySolver();
-};
-
-#endif // ENTROPYSOLVER_H

code/include/pnsolver.h → code/include/solvers/pnsolver.h

@@ -3,10 +3,7 @@
 
 #include <cmath>
 
-#include "solver.h"
-#include "typedef.h"
-
-#include "settings/config.h"
+#include "solvers/solver.h"
 
 class PNSolver : public Solver
 {

code/include/snsolver.h → code/include/solvers/snsolver.h

@@ -3,10 +3,7 @@
 
 #include <mpi.h>
 
-#include "solver.h"
-#include "typedef.h"
-
-#include "settings/config.h"
+#include "solvers/solver.h"
 
 class SNSolver : public Solver
 {

code/include/snsolverMPI.h → code/include/solvers/snsolverMPI.h

@@ -3,10 +3,7 @@
 
 #include <mpi.h>
 
-#include "solver.h"
-#include "typedef.h"
-
-#include "settings/config.h"
+#include "solvers/solver.h"
 
 class SNSolverMPI : public Solver
 {

code/include/solver.h → code/include/solvers/solver.h

@@ -4,13 +4,13 @@
 #include <string>
 
 // include Matrix, Vector definitions
+#include "fluxes/numericalflux.h"
 #include "io.h"
 #include "kernels/scatteringkernelbase.h"
-#include "numericalflux.h"
 #include "problems/problembase.h"
 #include "quadratures/quadraturebase.h"
 #include "settings/config.h"
-#include "typedef.h"
+#include "settings/typedef.h"
 
 class Solver
 {

code/include/toolboxes/textprocessingtoolbox.h

@@ -11,7 +11,7 @@
 #include <string>
 #include <vector>
 
-#include "typedef.h"
+#include "settings/typedef.h"
 
 namespace TextProcessingToolbox {
 

code/input/example.cfg

@@ -23,6 +23,8 @@ SOLVER = PN_SOLVER
 CFL_NUMBER = 0.8
 % Final time for simulation
 TIME_FINAL = 0.3
+%
+CLEAN_FLUX_MATRICES = NO
 
 % ---- Boundary Conditions ----
 % Example: BC_DIRICLET = (dummyMarker1, dummyMarker2)
@@ -33,4 +35,4 @@ BC_DIRICHLET = ( void )
 % Quadrature Type
 QUAD_TYPE = MONTE_CARLO
 % Quadrature Order
-QUAD_ORDER = 4
+QUAD_ORDER = 1

code/src/laxfriedrichsflux.cpp → code/src/fluxes/laxfriedrichsflux.cpp

-#include "laxfriedrichsflux.h"
+#include "fluxes/laxfriedrichsflux.h"
 
 LaxFriedrichsFlux::LaxFriedrichsFlux( Config* settings ) : NumericalFlux( settings ) {}